Bioinformatics: Using the Ensembl Genome Browser BeginnersPrerequisites
The Ensembl project provides a comprehensive and integrated source of annotation of, mainly vertebrate, genome sequences. This one-day workshop offers a comprehensive practical introduction to the use of the Ensembl genome browser as well as essential background information.
Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book or register Interest by linking here.
- Our courses are open to all who might benefit
- Booking priority is given to people from Cambridge University and Collaborating Institutes
- Individual Course fees are required only from External participants not from Collaborating Institutes
- Basic computing skills
- Graduate level in Life Sciences
- Knowledge of basic genetics and basic bioinformatics terminology is very helpful for this course
- Introduction to Ensembl: origin, goals and organization of the Ensembl project
- Worked example: guided tour of the most important pages of the Ensembl website
- Data mining with BioMart: retrieving datasets using the data mining tool BioMart
- Comparative genomics and proteomics: orthologues, protein families, whole genome alignments and syntenic regions
- Variation: SNPs and other polymorphisms, haplotypes, linkage disquilibrium, structual variants like CNVs
To enable participants to access genomes with confidence
Presentations, demonstrations and practicals
- None of our current courses require you to bring your own computer, however, if you want to bring a laptop and have it online we can arrange access via the University Lapwing wireless service
- Participants are encouraged to bring problems/questions about their research to try to tackle these during the workshop using Ensembl
1
A number of times per year
Events available